9ENZ
X-ray structure of the adduct formed upon reaction of picoplatin with lysozyme (structure A)
This is a non-PDB format compatible entry.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ELETTRA BEAMLINE 11.2C |
Synchrotron site | ELETTRA |
Beamline | 11.2C |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-12-04 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.00 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 78.400, 78.400, 37.150 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 39.203 - 1.600 |
Rwork | 0.183 |
R-free | 0.22980 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.010 |
RMSD bond angle | 1.699 |
Data reduction software | autoPROC |
Data scaling software | autoPROC |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0258) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 39.203 | 1.630 |
High resolution limit [Å] | 1.600 | 1.600 |
Rmerge | 0.070 | 1.253 |
Number of reflections | 15767 | 762 |
<I/σ(I)> | 25.3 | 3.2 |
Completeness [%] | 99.6 | 99.3 |
Redundancy | 21.6 | 23.5 |
CC(1/2) | 0.999 | 0.887 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 4.5 | 298 | 20% ethylene glycol, 0.6 M sodium nitrate and 0.1 sodium acetate pH 4.5 |