9EMP
Crystal structure of Histidine acetyltransferase with N-myristoyl histidine and coenzyme A
This is a non-PDB format compatible entry.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, DESY BEAMLINE P11 |
Synchrotron site | PETRA III, DESY |
Beamline | P11 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-12-04 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 1.033 |
Spacegroup name | I 2 2 2 |
Unit cell lengths | 49.929, 111.853, 156.855 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 47.370 - 1.450 |
R-factor | 0.1885 |
Rwork | 0.188 |
R-free | 0.20940 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.009 |
RMSD bond angle | 1.068 |
Data reduction software | XDS (Jan 31, 2020) |
Data scaling software | XDS (Jan 31, 2020) |
Phasing software | PHASER (2.8.3) |
Refinement software | PHENIX (1.19.1_4122) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 91.100 | 1.540 |
High resolution limit [Å] | 1.450 | 1.450 |
Rmeas | 0.057 | 2.670 |
Number of reflections | 75754 | 11509 |
<I/σ(I)> | 16.41 | 0.69 |
Completeness [%] | 96.6 | 91.8 |
Redundancy | 6.7 | |
CC(1/2) | 1.000 | 0.505 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 277 | Protein buffer: 10 mM Tris-HCl pH 7.5, 150 mM NaCl, 10% glycerol, 1 mM L-Histidine, 0.7 mM Myr-CoA. Well solution: 0.1 M Bis-tris pH 6.8, 22% PEG3350. Cryo solution: 0.1 M Bis-tris pH 6.8, 22% PEG3350, 20% Glycerol |