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9EH9

Crystal structure of unbound N-SH2 domain of SHP2

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 5.0.2
Synchrotron siteALS
Beamline5.0.2
Temperature [K]100
Detector technologyPIXEL
Collection date2021-09-24
DetectorDECTRIS PILATUS3 6M
Wavelength(s)1.0004
Spacegroup nameP 43 21 2
Unit cell lengths60.464, 60.464, 78.293
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution42.750 - 1.830
R-factor0.2322
Rwork0.230
R-free0.25490
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.005
RMSD bond angle0.813
Data reduction softwareiMOSFLM
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX (1.21rc1_5015)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]42.7501.900
High resolution limit [Å]1.8301.830
Number of reflections132921420
<I/σ(I)>26
Completeness [%]99.5
Redundancy15
CC(1/2)1.0000.300
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP291500 nL of 10 mg/mL SHP2 N-SH2 in 50 mM Bis-Tris pH 6.5, 50 mM NaCl, 1 mM TCEP; 500 nL of 1.0 M sodium malonate pH 5.0, 0.1 M sodium acetate trihydrate pH 4.5, and 2% w/v polyethylene glycol 20,000

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