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9ECY

Crystal structure of the SARS-CoV-2 NTD-targeted neutralizing antibody WRAIR-2039

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 24-ID-E
Synchrotron siteAPS
Beamline24-ID-E
Temperature [K]100
Detector technologyPIXEL
Collection date2021-03-03
DetectorDECTRIS EIGER X 16M
Wavelength(s)0.979180
Spacegroup nameP 21 21 21
Unit cell lengths63.422, 69.071, 102.475
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution53.930 - 1.540
R-factor0.159
Rwork0.157
R-free0.19420
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.021
RMSD bond angle1.785
Data reduction softwareXDS
Data scaling softwareXDS
Phasing softwarePHASER
Refinement softwarePHENIX ((1.21.1_5286: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]102.4801.560
High resolution limit [Å]1.5301.530
Number of reflections624891167
<I/σ(I)>14.7
Completeness [%]92.9
Redundancy3.4
CC(1/2)0.9100.555
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP6.52910.12 M alcohol mixture (1,6-Hexanediol; 1-Butanol; 1,2-Propanediol; 2-Propanol; 1,4-Butanediol; 1,3-Propanediol), 0.1 M buffer system 1 (imidazole and MES monohydrate, pH 6.5), 30% precipitant mix 1 (40% v/v PEG 500 MME; 20% v/v PEG 20000)

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