9E5D
Discovery of an Orally Biovailable KRAS G12D Inhibitor
This is a non-PDB format compatible entry.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 17-ID |
Synchrotron site | APS |
Beamline | 17-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-02-09 |
Detector | DECTRIS EIGER2 X 9M |
Wavelength(s) | 1 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 40.040, 53.710, 88.850 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 45.960 - 1.360 |
Rwork | 0.167 |
R-free | 0.19300 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.012 |
RMSD bond angle | 2.068 |
Data reduction software | autoPROC |
Data scaling software | autoPROC |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0425) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 45.960 | 1.430 |
High resolution limit [Å] | 1.360 | 1.360 |
Rmerge | 0.063 | 0.690 |
Rmeas | 0.069 | 0.860 |
Rpim | 0.027 | 0.510 |
Number of reflections | 33993 | 1701 |
<I/σ(I)> | 14.1 | 1.1 |
Completeness [%] | 87.0 | 37.8 |
Redundancy | 5.7 | 2.3 |
CC(1/2) | 0.998 | 0.540 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 0.2M (NH4)3 Citrate, 20% (w/v) PEG 3350 |