9E2B
Structure of a solute binding protein from Desulfonauticus sp. bound to L-tryptophan
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX2 |
Synchrotron site | Australian Synchrotron |
Beamline | MX2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2024-10-03 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.9537 |
Spacegroup name | P 1 |
Unit cell lengths | 74.507, 74.593, 92.348 |
Unit cell angles | 98.21, 91.24, 119.84 |
Refinement procedure
Resolution | 39.140 - 1.800 |
R-factor | 0.1866 |
Rwork | 0.185 |
R-free | 0.21610 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.007 |
RMSD bond angle | 0.886 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX ((1.20.1_4487: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 39.140 | 1.830 |
High resolution limit [Å] | 1.800 | 1.800 |
Rmerge | 0.089 | 1.254 |
Rmeas | 0.104 | 1.461 |
Rpim | 0.054 | 0.746 |
Total number of observations | 568516 | 28491 |
Number of reflections | 153832 | 7559 |
<I/σ(I)> | 7.6 | 0.8 |
Completeness [%] | 97.8 | |
Redundancy | 3.7 | 3.8 |
CC(1/2) | 0.993 | 0.484 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 291 | 27% PEG 3350, 0.1M sodium acetate pH 4.5 |