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9DNR

Structure of UBR2-RWF complex

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 8.2.1
Synchrotron siteALS
Beamline8.2.1
Temperature [K]77
Detector technologyPIXEL
Collection date2022-11-08
DetectorDECTRIS PILATUS3 6M
Wavelength(s)0.97648
Spacegroup nameP 1 21 1
Unit cell lengths29.235, 36.957, 29.615
Unit cell angles90.00, 109.56, 90.00
Refinement procedure
Resolution27.910 - 1.220
R-factor0.1682
Rwork0.168
R-free0.17990
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.007
RMSD bond angle0.955
Data reduction softwareDIALS
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwarePHENIX ((1.20.1_4487: ???))
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0001.240
High resolution limit [Å]1.2203.3101.220
Rmerge0.0700.0370.173
Rmeas0.0790.0420.197
Rpim0.0370.0200.093
Total number of observations71322
Number of reflections17252879718
<I/σ(I)>23.2
Completeness [%]96.494.681.2
Redundancy4.14.13.8
CC(1/2)0.9940.9970.951
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.3293.15For UBR2UBR-RWF co-crystal, the ligand to protein molar ratio is 1:5 and the reservoir contains 0.1 M Bis-Tris pH6.3 with 29% PEG 3350. The stock concentration of UBR2UBR for co-crystallization is 6.2 mg/ml.

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PDB entries from 2025-12-03

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