Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

9DL3

Structure of proline utilization A complexed with quinoline-2-carboxylic acid

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 4.2.2
Synchrotron siteALS
Beamline4.2.2
Temperature [K]100
Detector technologyCMOS
Collection date2023-06-30
DetectorRDI CMOS_8M
Wavelength(s)1.072156
Spacegroup nameP 1 21 1
Unit cell lengths100.961, 102.330, 127.061
Unit cell angles90.00, 105.96, 90.00
Refinement procedure
Resolution48.530 - 1.770
R-factor0.1774
Rwork0.177
R-free0.21290
Structure solution methodFOURIER SYNTHESIS
RMSD bond length0.006
RMSD bond angle0.844
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX (1.21rc1_5156)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]48.5301.800
High resolution limit [Å]1.7701.770
Rmerge0.0790.917
Rmeas0.0941.192
Rpim0.0510.749
Total number of observations20177
Number of reflections4126298678
<I/σ(I)>12.30.8
Completeness [%]95.5
Redundancy3.32.3
CC(1/2)0.9960.426
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP293Reservoir contained 0.1 M HEPES, pH 7.5, 0.1 M sodium formate, 0.1 M magnesium chloride, 0.15 M ammonium sulfate, and 22% (w/v) PEG 3350. Crystal was soaked in cryobuffer containing 50 mM quinoline-2-carboxylic acid and 20% PEG 200

246031

PDB entries from 2025-12-10

PDB statisticsPDBj update infoContact PDBjnumon