9DIF
CBASS Pseudomonas syringae Cap5 tetramer with DNA duplex and 3'2'-c-GAMP cyclic dinucleotide ligand
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS-II BEAMLINE 17-ID-1 |
Synchrotron site | NSLS-II |
Beamline | 17-ID-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2023-06-22 |
Detector | DECTRIS EIGER2 S 9M |
Wavelength(s) | 0.920105 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 105.021, 194.171, 118.626 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 39.320 - 1.670 |
R-factor | 0.1718 |
Rwork | 0.170 |
R-free | 0.21070 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.015 |
RMSD bond angle | 1.283 |
Data reduction software | XDS (Jan 10, 2022 (BUILT 20220820)) |
Data scaling software | Aimless (0.7.7) |
Phasing software | PHASER |
Refinement software | PHENIX ((1.20.1_4487: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 97.086 | 1.941 |
High resolution limit [Å] | 1.670 | 1.670 |
Rmerge | 0.152 | |
Number of reflections | 69262 | 3464 |
<I/σ(I)> | 8.5 | 2 |
Completeness [%] | 94.3 | 70.3 |
Redundancy | 8 | 6.4 |
CC(1/2) | 0.995 | 0.598 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 9 | 293 | 10 mM tri-sodium citrate titrated to pH 9.0; 26-30% PEG6000 |