Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

9DG0

T-junction triangle 7-6

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU R-AXIS IV
Temperature [K]100
Detector technologyIMAGE PLATE
Collection date2016-08-18
DetectorRIGAKU RAXIS IV++
Wavelength(s)1.54
Spacegroup nameH 3
Unit cell lengths167.218, 167.218, 80.113
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution32.320 - 6.530
R-factor0.1715
Rwork0.166
R-free0.21840
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.017
RMSD bond angle1.537
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwarePHENIX (1.20.1_4487)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0006.630
High resolution limit [Å]6.4006.400
Rpim0.041
Number of reflections1703173
<I/σ(I)>13.5
Completeness [%]99.3
Redundancy6.6
CC(1/2)0.932
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP298DNA strands mixed with TAE/Mg2+ and 0.001 M Magnesium chloride hexahydrate, 0.005 M Tris hydrochloride, pH=7.5, 0.16 M Ammonium sulfate, 0.23 M sucrose and crystallized against (NH4)2SO4

251174

PDB entries from 2026-03-25

PDB statisticsPDBj update infoContact PDBjnumon