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9DEW

Crystal structure of NDM-1 complexed with compound 2

This is a non-PDB format compatible entry.
Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 19-ID
Synchrotron siteAPS
Beamline19-ID
Temperature [K]100
Detector technologyPIXEL
Collection date2021-11-25
DetectorDECTRIS PILATUS3 6M
Wavelength(s)0.97918
Spacegroup nameP 1 21 1
Unit cell lengths40.980, 59.698, 42.400
Unit cell angles90.00, 93.38, 90.00
Refinement procedure
Resolution42.330 - 1.650
R-factor0.15592
Rwork0.154
R-free0.18828
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.011
RMSD bond angle1.577
Data reduction softwareHKL-3000
Data scaling softwareHKL-3000
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0267)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0001.680
High resolution limit [Å]1.6501.650
Rmerge0.0680.451
Number of reflections229081150
<I/σ(I)>13.962.24
Completeness [%]94.6
Redundancy3
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP29350 mM Potassium phosphate monobasic, 10 mM Calcium chloride, 25% (w/v) PEG8000

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