Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

9D7Y

Crystal structure of scFv corresponding to human autoantibody b96.11

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAUSTRALIAN SYNCHROTRON BEAMLINE MX2
Synchrotron siteAustralian Synchrotron
BeamlineMX2
Temperature [K]100
Detector technologyPIXEL
Collection date2019-08-15
DetectorDECTRIS EIGER X 16M
Wavelength(s)0.9537
Spacegroup nameP 21 21 21
Unit cell lengths96.544, 103.963, 85.088
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution45.770 - 2.600
R-factor0.2329
Rwork0.227
R-free0.30080
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.009
RMSD bond angle1.316
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHENIX
Refinement softwarePHENIX (1.20.1-4487)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]45.7702.690
High resolution limit [Å]2.6002.600
Rmerge0.137
Rpim0.940
Number of reflections262422526
<I/σ(I)>3.920.68
Completeness [%]85.770.06
Redundancy1.91.9
CC(1/2)0.9680.362
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.5293The hanging drop contained 1 microliter of mother liquor combined with 1 microliter of 20 mg/mL b96.11 scFv protein solution. Crystals formed as shards within 24 hours at 293 K, with final crystals being selected from well conditions containing 0.1M Bis-Tris pH 6.5, 2.5M (NH4)2SO4

238895

PDB entries from 2025-07-16

PDB statisticsPDBj update infoContact PDBjnumon