9D44
Crystal structure of Co(II)-bound polysaccharide deacetylase from Bacteroides ovatus
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | ALS BEAMLINE 8.2.2 |
| Synchrotron site | ALS |
| Beamline | 8.2.2 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2021-10-22 |
| Detector | DECTRIS PILATUS3 2M |
| Wavelength(s) | 1.00 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 69.177, 73.162, 95.424 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 44.470 - 1.420 |
| R-factor | 0.1607 |
| Rwork | 0.160 |
| R-free | 0.20070 |
| Structure solution method | MOLECULAR REPLACEMENT |
| RMSD bond length | 0.005 |
| RMSD bond angle | 0.776 |
| Data reduction software | XDS |
| Data scaling software | Aimless |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 44.470 | 1.471 |
| High resolution limit [Å] | 1.420 | 1.420 |
| Rmerge | 0.112 | 1.342 |
| Rpim | 0.039 | 0.463 |
| Number of reflections | 91845 | 9050 |
| <I/σ(I)> | 16.37 | 2.46 |
| Completeness [%] | 99.9 | 100 |
| Redundancy | 9.2 | 9.3 |
| CC(1/2) | 0.998 | 0.807 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 8.5 | 277 | 0.17 M NaOAc, 0.1 M Tris pH 8.5, 15% glycerol, 27% PEG 4000, [Protein]=16.5 mg/mL |






