9D1Y
Structure of G75R Ubiquitin bound to KLHDC3-EloB/C
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 5.0.1 |
Synchrotron site | ALS |
Beamline | 5.0.1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2023-12-19 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.97741 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 114.560, 121.543, 152.949 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 45.850 - 2.600 |
R-factor | 0.1701 |
Rwork | 0.168 |
R-free | 0.21620 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.008 |
RMSD bond angle | 0.921 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.21_5207) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.690 |
High resolution limit [Å] | 2.600 | 5.600 | 2.600 |
Rmerge | 0.146 | 0.062 | 0.782 |
Rmeas | 0.156 | 0.066 | 0.830 |
Rpim | 0.053 | 0.023 | 0.276 |
Number of reflections | 33218 | 3498 | 3275 |
<I/σ(I)> | 3.4 | ||
Completeness [%] | 100.0 | 100 | 100 |
Redundancy | 8.4 | 8 | 8.7 |
CC(1/2) | 1.000 | 0.997 | 0.849 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 277 | 10%PEG5KMME, 5% Tacsimate pH=7.0, 0.1M HEPES pH=7.0 |