9CK9
[7F1F-AgR3-int] Tensegrity triangle with 2-thiothymidine modification in the junction region intercalating Ag+ between base pair stacks with R3 symmetry
This is a non-PDB format compatible entry.
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | APS BEAMLINE 17-ID |
| Synchrotron site | APS |
| Beamline | 17-ID |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2021-12-12 |
| Detector | DECTRIS EIGER2 X 9M |
| Wavelength(s) | 1.00743 |
| Spacegroup name | H 3 |
| Unit cell lengths | 105.679, 105.679, 88.730 |
| Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
| Resolution | 32.230 - 4.553 |
| R-factor | 0.1644 |
| Rwork | 0.162 |
| R-free | 0.17350 |
| Structure solution method | SAD |
| RMSD bond length | 0.009 |
| RMSD bond angle | 1.169 |
| Data reduction software | autoPROC |
| Data scaling software | STARANISO |
| Phasing software | AutoSol |
| Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 63.705 | 63.705 | 5.132 |
| High resolution limit [Å] | 4.553 | 10.169 | 4.553 |
| Number of reflections | 2758 | 191 | 196 |
| <I/σ(I)> | 10.9 | ||
| Completeness [%] | 86.1 | 99 | 56.6 |
| Redundancy | 10.7 | 11.3 | 11 |
| CC(1/2) | 0.999 | 0.999 | 0.197 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 8 | 293 | 100 mM MOPS, 1.25 M magnesium sulfate |
