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9CH7

Structure of the alpha-N-methyltransferase (SonM) and RiPP precursor (SonA-Y62A) heteromeric complex (bound to SAH - structure 1)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 23-ID-D
Synchrotron siteAPS
Beamline23-ID-D
Temperature [K]100
Detector technologyPIXEL
Collection date2023-02-26
DetectorDECTRIS PILATUS3 6M
Wavelength(s)1.0332
Spacegroup nameP 1 21 1
Unit cell lengths72.170, 111.480, 85.540
Unit cell angles90.00, 96.83, 90.00
Refinement procedure
Resolution60.280 - 2.200
R-factor0.18215
Rwork0.180
R-free0.21898
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.001
RMSD bond angle0.752
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwareMOLREP
Refinement softwareREFMAC (5.8.0419)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]60.2802.300
High resolution limit [Å]2.2002.200
Rmeas0.0730.761
Number of reflections680518440
<I/σ(I)>14.43
Completeness [%]99.8
Redundancy5.45
CC(1/2)0.9990.815
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP5.5298240 mM sodium malonate pH 5.5 and 22% PEG 3350

231029

PDB entries from 2025-02-05

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