9C8P
High-resolution structure of cytochrome c peroxidase from yeast at ambient temperature and 3.0 kbar
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | CHESS BEAMLINE 7B2 |
Synchrotron site | CHESS |
Beamline | 7B2 |
Temperature [K] | 293 |
Detector technology | PIXEL |
Collection date | 2022-12-10 |
Detector | DECTRIS EIGER2 S 16M |
Wavelength(s) | 0.78470 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 44.711, 74.253, 101.312 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 27.490 - 2.310 |
R-factor | 0.2226 |
Rwork | 0.217 |
R-free | 0.27310 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.002 |
RMSD bond angle | 0.526 |
Data scaling software | HKL-2000 (v722) |
Phasing software | PHENIX (1.21_5207) |
Refinement software | PHENIX (1.21_5207) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 27.490 | 2.370 |
High resolution limit [Å] | 2.310 | 2.310 |
Rmerge | 0.181 | 0.654 |
Rmeas | 0.200 | 0.725 |
Rpim | 0.082 | 0.298 |
Number of reflections | 14623 | 1096 |
<I/σ(I)> | 7.2 | 2 |
Completeness [%] | 95.0 | 93.36 |
Redundancy | 5.5 | |
CC(1/2) | 0.973 | 0.651 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 10-25 % polyethylene glycol 550 (MME) and 100 mM 2-(N-morpholino)ethanesulfonic acid (pH 6.1-7.1) |