9C5D
E. coli peptidyl-prolyl cis-trans isomerase containing (2S,3S)-4-Fluorovaline
This is a non-PDB format compatible entry.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX2 |
Synchrotron site | Australian Synchrotron |
Beamline | MX2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2023-11-19 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.9537 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 79.623, 84.005, 123.432 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 42.180 - 1.300 |
R-factor | 0.1654 |
Rwork | 0.164 |
R-free | 0.18600 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.006 |
RMSD bond angle | 1.032 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 42.180 | 1.320 |
High resolution limit [Å] | 1.300 | 1.300 |
Rmerge | 0.065 | 2.107 |
Rmeas | 0.067 | 2.194 |
Rpim | 0.018 | 0.610 |
Total number of observations | 2724991 | 127100 |
Number of reflections | 203025 | 9926 |
<I/σ(I)> | 18.1 | 1.3 |
Completeness [%] | 100.0 | |
Redundancy | 13.4 | 12.8 |
CC(1/2) | 0.999 | 0.514 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 291 | 31 % (w/v) PEG 3350, 0.1 M Tris pH 7.0, 0.2 M Sodium acetate trihydrate |