9C36
Proline utilization A complexed with the substrate L-glutamate gamma-semialdehyde in the aldehyde dehydrogenase active site
This is a non-PDB format compatible entry.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 4.2.2 |
Synchrotron site | ALS |
Beamline | 4.2.2 |
Temperature [K] | 100 |
Detector technology | CMOS |
Collection date | 2022-04-29 |
Detector | RDI CMOS_8M |
Wavelength(s) | 1.07216 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 100.870, 101.820, 126.030 |
Unit cell angles | 90.00, 106.53, 90.00 |
Refinement procedure
Resolution | 48.350 - 1.470 |
R-factor | 0.1815 |
Rwork | 0.180 |
R-free | 0.20680 |
Structure solution method | FOURIER SYNTHESIS |
RMSD bond length | 0.009 |
RMSD bond angle | 1.072 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHENIX |
Refinement software | PHENIX ((1.20.1_4487: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.350 | 1.500 |
High resolution limit [Å] | 1.470 | 1.470 |
Rmerge | 0.069 | 0.910 |
Rmeas | 0.076 | 1.171 |
Rpim | 0.031 | 0.723 |
Total number of observations | 37151 | |
Number of reflections | 751867 | 16019 |
<I/σ(I)> | 12.6 | 0.8 |
Completeness [%] | 97.7 | |
Redundancy | 4.9 | 2.3 |
CC(1/2) | 0.998 | 0.357 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 286 | CRYSTALLIZATION: 5 mg/mL PROTEIN, 14% (W/V) PEG-3350, 0.2M AMMONIUM SULFATE, 0.1M MGCL2, 0.1M HEPES AT PH 8.0, 0.1M NA FORMATE, 10 mM NAD+. CRYTAL WAS SOAKED IN 20% (W/V) PEG-200, 40 mM L-PROLINE, 1 mM COENZYME Q1, 1mM NAD+ for 1 MIN AND THEN FLASH-COOLED IN LIQUID NITROGEN |