9BTP
Structure of human SHOC2 in complex with a small molecule inhibitor (S)-5
This is a non-PDB format compatible entry.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 17-ID |
Synchrotron site | APS |
Beamline | 17-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-12-05 |
Detector | DECTRIS EIGER X 9M |
Wavelength(s) | 1 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 37.768, 69.717, 198.266 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 57.030 - 2.370 |
R-factor | 0.194 |
Rwork | 0.190 |
R-free | 0.26260 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.008 |
RMSD bond angle | 1.026 |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 65.769 | 2.377 |
High resolution limit [Å] | 2.369 | 2.369 |
Rmerge | 0.279 | 1.648 |
Number of reflections | 22184 | 210 |
<I/σ(I)> | 8.3 | |
Completeness [%] | 100.0 | 100 |
Redundancy | 13.2 | 13 |
CC(1/2) | 0.992 | 0.679 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 277 | See reference. Crystals of apo SHOC2 in space group p212121 were incubated with compound and harvested. 50 mM Tris pH 7.0, 200 mM KCl, 40% PP 5/4 PO/OH |