9BJT
X-ray crystal structure of Y62F Thermothelomyces thermophilus polysaccharide monooxygenase 9E
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 5.0.2 |
Synchrotron site | ALS |
Beamline | 5.0.2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2023-12-15 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 1.00004 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 107.894, 114.606, 91.417 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 39.510 - 3.000 |
R-factor | 0.2299 |
Rwork | 0.226 |
R-free | 0.26260 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.008 |
RMSD bond angle | 1.093 |
Data reduction software | iMOSFLM |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 39.510 | 3.180 |
High resolution limit [Å] | 3.000 | 3.000 |
Rmerge | 0.341 | 0.572 |
Rpim | 0.205 | 0.344 |
Number of reflections | 11339 | 1779 |
<I/σ(I)> | 3.1 | 1.9 |
Completeness [%] | 90.4 | 96.3 |
Redundancy | 3.1 | 3.3 |
CC(1/2) | 0.839 | 0.680 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 293 | The crystal was grown by hanging drop in conditions optimized from Hampton Index HT G8 (0.2 M Ammonium acetate, 0.1 M HEPES pH 7.5, 28 % w/v polyethylene glycol 3,350). 1 ul 28 mg/mL Y62F Mt PMO9E in 50 mM MOPS, 50 mM MES was mixed with 1 uL with 0.2 M Ammonium acetate, 0.1 M HEPES pH 7.5, and 26% PEG 3,350. The crystal was then cryoprotected for 6 seconds in well solution mixed with cryoprotectants to a final concentration of 8% w/v sucrose, 2% w/v glucose, 8% v/v glycerol, and 8% ethylene glycol |