9BJS
X-ray crystal structure of Y62W Thermothelomyces thermophilus polysaccharide monooxygenase 9E
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 5.0.2 |
Synchrotron site | ALS |
Beamline | 5.0.2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2023-12-15 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 1.00003 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 99.692, 122.395, 91.699 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 43.790 - 2.000 |
R-factor | 0.1999 |
Rwork | 0.199 |
R-free | 0.23330 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.003 |
RMSD bond angle | 0.573 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 43.790 | 2.050 |
High resolution limit [Å] | 2.000 | 2.000 |
Rmerge | 0.102 | 0.429 |
Rpim | 0.042 | 0.175 |
Number of reflections | 38124 | 2772 |
<I/σ(I)> | 14.4 | 4.3 |
Completeness [%] | 99.7 | 98.8 |
Redundancy | 6.9 | 6.7 |
CC(1/2) | 0.995 | 0.942 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 293 | The crystal was grown by hanging drop in conditions optimized from Hampton Index HT G8 (0.2 M Ammonium acetate, 0.1 M HEPES pH 7.5, 25 % w/v polyethylene glycol 3,350). 1 ul 30 mg/mL Y62W Mt PMO9E in 50 mM MOPS, 50 mM MES was mixed with 1 uL with 0.2 M Ammonium acetate, 0.1 M HEPES pH 7.5, and 26% PEG 3,350. The crystal was then cryoprotected for 10 seconds in well solution mixed with cryoprotectants to a final concentration of 8% w/v sucrose, 2% w/v glucose, 8% v/v glycerol, and 8% ethylene glycol |