9BH3
Structure of apo Aggregatibacter actinomycetemcomitans SiaP protein
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX2 |
| Synchrotron site | Australian Synchrotron |
| Beamline | MX2 |
| Temperature [K] | 110 |
| Detector technology | PIXEL |
| Collection date | 2019-05-05 |
| Detector | DECTRIS EIGER X 16M |
| Wavelength(s) | 0.91840 |
| Spacegroup name | C 1 2 1 |
| Unit cell lengths | 138.667, 141.394, 109.405 |
| Unit cell angles | 90.00, 112.49, 90.00 |
Refinement procedure
| Resolution | 48.640 - 2.580 |
| R-factor | 0.19069 |
| Rwork | 0.189 |
| R-free | 0.21965 |
| Structure solution method | MOLECULAR REPLACEMENT |
| RMSD bond length | 0.016 |
| RMSD bond angle | 1.530 |
| Data reduction software | XDS |
| Data scaling software | Aimless |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.20) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 48.640 | 2.650 |
| High resolution limit [Å] | 2.580 | 2.580 |
| Number of reflections | 61226 | 2476 |
| <I/σ(I)> | 6.3 | 1.6 |
| Completeness [%] | 100.0 | |
| Redundancy | 3.6 | |
| CC(1/2) | 0.995 | 0.783 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 292 | Drops consisting of 400 nL of mother-liquor and protein solution (AaSiaP at 20 mg/mL along with and without 0.75 mM Neu5Ac in SEC buffer) were mixed using the Mosquito Protein Crystallization System and the sitting-drop vapor-diffusion method and incubated at 20 C. Apo AaSiaP crystals that grew in SG1 conditions C11 (0.2 M sodium acetate trihydrate, 0.1 M sodium cacodylate, pH 6.5, 30% (w/v) PEG 8000) |






