9BCB
Crystal structure of human cellular retinol binding protein 3 in complex with C11 TopFluor MG
This is a non-PDB format compatible entry.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-E |
Synchrotron site | APS |
Beamline | 24-ID-E |
Temperature [K] | 85 |
Detector technology | PIXEL |
Collection date | 2017-03-17 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.9792 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 41.213, 46.257, 71.530 |
Unit cell angles | 90.00, 92.10, 90.00 |
Refinement procedure
Resolution | 19.600 - 1.450 |
R-factor | 0.1885 |
Rwork | 0.187 |
R-free | 0.22210 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.007 |
RMSD bond angle | 1.121 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | BALBES |
Refinement software | PHENIX ((1.18.2_3874: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 19.600 | 1.470 |
High resolution limit [Å] | 1.450 | 1.450 |
Rmerge | 0.043 | 0.545 |
Rmeas | 0.059 | 0.764 |
Rpim | 0.032 | 0.535 |
Number of reflections | 47122 | 2330 |
<I/σ(I)> | 12.2 | 1.7 |
Completeness [%] | 98.5 | 98.3 |
Redundancy | 3.3 | 3.2 |
CC(1/2) | 0.999 | 0.807 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5 | 293 | 0.2 M sodium malonate, pH 5.0 and 20% PEG 3350 (w/v) |