9AZ9
Chloride Sites in Photoactive Yellow Protein (Chloride-Free Reference Structure)
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | ROTATING ANODE |
| Source details | RIGAKU FR-E SUPERBRIGHT |
| Temperature [K] | 293 |
| Detector technology | CCD |
| Collection date | 2012-08-10 |
| Detector | RIGAKU SATURN A200 |
| Wavelength(s) | 1.54 |
| Spacegroup name | P 63 |
| Unit cell lengths | 66.890, 66.890, 40.930 |
| Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
| Resolution | 21.890 - 2.000 |
| R-factor | 0.1399 |
| Rwork | 0.136 |
| R-free | 0.17590 |
| Structure solution method | MOLECULAR REPLACEMENT |
| RMSD bond length | 0.006 |
| RMSD bond angle | 0.860 |
| Data reduction software | XDS (March 15, 2012) |
| Data scaling software | XSCALE (March 15, 2012) |
| Refinement software | PHENIX (1.21_5207) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 21.890 | 2.050 |
| High resolution limit [Å] | 2.000 | 2.000 |
| Rmerge | 0.022 | 0.038 |
| Rmeas | 0.024 | |
| Number of reflections | 13465 | 819 |
| <I/σ(I)> | 50 | |
| Completeness [%] | 97.2 | 79.1 |
| Redundancy | 5.5 | 5.5 |
| CC(1/2) | 1.000 | 0.997 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 9 | 293 | 2.5 M ammonium sulfate, 1.5 M sodium chloride, 20 mM sodium phosphate, dialyzed against (1) 3.0 M ammonium sulfate, 0.5 M sodium chloride, 20 mM sodium phosphate, then (2) 3.5 M ammonium sulfate, 20 mM sodium phosphate |






