8ZXI
Peptide channel interactions in the truncated VhChiP nanopore
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | NSRRC BEAMLINE TPS 05A |
| Synchrotron site | NSRRC |
| Beamline | TPS 05A |
| Temperature [K] | 110 |
| Detector technology | CCD |
| Collection date | 2020-08-17 |
| Detector | MARMOSAIC 300 mm CCD |
| Wavelength(s) | 0.97 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 85.085, 182.602, 196.808 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 19.870 - 3.120 |
| R-factor | 0.198 |
| Rwork | 0.195 |
| R-free | 0.25190 |
| Structure solution method | MOLECULAR REPLACEMENT |
| RMSD bond length | 0.010 |
| RMSD bond angle | 1.113 |
| Data reduction software | HKL-2000 |
| Data scaling software | HKL-2000 |
| Phasing software | PHENIX |
| Refinement software | PHENIX ((1.19.2_4158: ???)) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 20.000 | 20.000 | 2.750 |
| High resolution limit [Å] | 2.700 | 7.220 | 2.700 |
| Rmerge | 0.077 | 1.787 | |
| Rmeas | 0.331 | 0.081 | 1.906 |
| Rpim | 0.089 | 0.022 | 0.645 |
| Number of reflections | 84382 | 4516 | 4118 |
| <I/σ(I)> | 14.2 | ||
| Completeness [%] | 99.1 | 99.8 | 97.3 |
| Redundancy | 13.6 | 13.8 | 7.2 |
| CC(1/2) | 0.925 | 0.994 | 0.504 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 292 | The final and optimized condition, which yielded substantial crystals, was identified as consisting of 0.1M magnesium nitrate hexahydrate, 0.05M magnesium acetate tetrahydrate, 0.1M sodium citrate at a pH of 6.5, and 20% w/v PEG 1500. |






