8ZPH
SFX reaction state structure (40-60min) of alanine racemase
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | FREE ELECTRON LASER |
Source details | PAL-XFEL BEAMLINE NCI |
Synchrotron site | PAL-XFEL |
Beamline | NCI |
Temperature [K] | 293 |
Detector technology | CCD |
Collection date | 2021-04-20 |
Detector | RAYONIX MX225-HS |
Wavelength(s) | 1 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 90.200, 112.900, 91.800 |
Unit cell angles | 90.00, 114.00, 90.00 |
Refinement procedure
Resolution | 67.320 - 2.300 |
R-factor | 0.2014 |
Rwork | 0.201 |
R-free | 0.25410 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6q72 |
RMSD bond length | 0.009 |
RMSD bond angle | 1.042 |
Data scaling software | CrystFEL |
Phasing software | PHENIX |
Refinement software | PHENIX ((1.19.2_4158: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 67.320 | 2.400 |
High resolution limit [Å] | 2.300 | 2.300 |
Number of reflections | 146722 | 20700 |
<I/σ(I)> | 5.04 | 1.09 |
Completeness [%] | 100.0 | |
Redundancy | 463 | |
CC(1/2) | 0.980 | 0.260 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | BATCH MODE | 8.5 | 293 | 100 mM Tris-Cl (pH 8.5), 0.25 M MgCl2, and 25% Peg 4K |