8ZOJ
The crystal structure of YegTK267A from the Nucleoside: H+ Symporter Family
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NFPSS BEAMLINE BL18U |
Synchrotron site | NFPSS |
Beamline | BL18U |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-05-01 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.9793 |
Spacegroup name | P 1 |
Unit cell lengths | 42.769, 58.212, 105.076 |
Unit cell angles | 77.85, 81.30, 68.46 |
Refinement procedure
Resolution | 39.139 - 2.913 |
R-factor | 0.2434 |
Rwork | 0.241 |
R-free | 0.26190 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.011 |
RMSD bond angle | 1.378 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX ((1.14_3260: ???)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 30.000 | 3.090 |
High resolution limit [Å] | 2.910 | 8.590 | 2.910 |
Rmerge | 0.078 | 0.029 | 1.594 |
Rmeas | 0.111 | 0.040 | 0.929 |
Number of reflections | 20090 | 182 | 1006 |
<I/σ(I)> | 4.03 | ||
Completeness [%] | 98.1 | ||
Redundancy | 3.43 | ||
CC(1/2) | 0.996 | 0.996 | 0.127 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | LIPIDIC CUBIC PHASE | 293 | 0.1 M MES (pH=5.8), 0.1 M Li2SO4, 0.1 M glycine, and 26% PEG550MME |