Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

8ZFV

Crystal Structure of C-terminal domain of nucleocapsid protein from SARS-CoV-2 in complex with ceftriaxone

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU MICROMAX-007 HF
Temperature [K]100
Detector technologyPIXEL
Collection date2022-08-24
DetectorRIGAKU HyPix-6000HE
Wavelength(s)1.54184
Spacegroup nameP 1
Unit cell lengths43.539, 46.643, 69.021
Unit cell angles106.66, 90.11, 93.46
Refinement procedure
Resolution26.580 - 2.000
R-factor0.15019
Rwork0.147
R-free0.20494
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6yun
RMSD bond length0.008
RMSD bond angle1.844
Data reduction softwareCrysalisPro
Data scaling softwareAimless
Phasing softwareMOLREP
Refinement softwareREFMAC (5.8.0419)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]26.5802.050
High resolution limit [Å]2.0002.000
Number of reflections348012572
<I/σ(I)>17.83.8
Completeness [%]99.2
Redundancy4.2
CC(1/2)0.9970.889
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP29330% PEG4000, 0.2 M Lithium sulfate, 50 mM Tris pH 8.0

246333

PDB entries from 2025-12-17

PDB statisticsPDBj update infoContact PDBjnumon