Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

8Z2T

Crystal structure of trehalose synthase from Deinococcus radiodurans complexed with validoxylamine A (VAA)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSRRC BEAMLINE TPS 05A
Synchrotron siteNSRRC
BeamlineTPS 05A
Temperature [K]100
Detector technologyCCD
Collection date2017-03-01
DetectorRAYONIX MX300-HS
Wavelength(s)1.000
Spacegroup nameP 21 21 21
Unit cell lengths135.276, 153.247, 154.662
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution29.990 - 2.830
R-factor0.1802
Rwork0.178
R-free0.22810
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.009
RMSD bond angle1.028
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwarePHENIX (1.21_5207)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]30.0002.930
High resolution limit [Å]2.8302.830
Rmerge0.0880.178
Number of reflections7683676836
<I/σ(I)>18.5
Completeness [%]99.6
Redundancy6.1
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP2930.1M Imidazole (pH6.5) and 1.0M Sodium acetate trihydrate

245663

PDB entries from 2025-12-03

PDB statisticsPDBj update infoContact PDBjnumon