Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

8YZ8

Crystal structure of PtmB in complex with Adenine

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRF BEAMLINE BL19U1
Synchrotron siteSSRF
BeamlineBL19U1
Temperature [K]100
Detector technologyPIXEL
Collection date2023-05-01
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.9785
Spacegroup nameI 41
Unit cell lengths145.406, 145.406, 129.178
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution30.270 - 2.860
R-factor0.2109
Rwork0.208
R-free0.27130
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.009
RMSD bond angle1.138
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX ((1.19.2_4158: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]30.2702.962
High resolution limit [Å]2.8602.860
Number of reflections310573125
<I/σ(I)>7.95
Completeness [%]99.9
Redundancy13.5
CC(1/2)0.9960.639
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.52930.1M Bis-Tris pH 5.5 0.2M Ammonium acetate 25% PEG3350

246031

PDB entries from 2025-12-10

PDB statisticsPDBj update infoContact PDBjnumon