8YYK
Structure of RNase J2 wild type at room temperature
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU R-AXIS IV |
Temperature [K] | 278 |
Detector technology | IMAGE PLATE |
Collection date | 2022-10-20 |
Detector | RIGAKU RAXIS IV |
Wavelength(s) | 1.541 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 65.304, 133.380, 117.751 |
Unit cell angles | 90.00, 92.02, 90.00 |
Refinement procedure
Resolution | 58.600 - 3.200 |
Rwork | 0.205 |
R-free | 0.24770 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.007 |
RMSD bond angle | 1.118 |
Data reduction software | MOSFLM |
Data scaling software | SCALA |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0350) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 58.600 | 3.370 |
High resolution limit [Å] | 3.200 | 3.200 |
Rmerge | 0.190 | 0.600 |
Number of reflections | 29972 | 4411 |
<I/σ(I)> | 4.6 | |
Completeness [%] | 90.1 | |
Redundancy | 2.6 | |
CC(1/2) | 0.920 | 0.480 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | BATCH MODE | 5.6 | 291 | 100mM tri-sodium citrate dihydrate pH 5.6, 20% PEG 4000, 20% Isopropanol, 40% Formamide |