8YSE
Crystal structure of the Deinococcus wulumuqiensis CD-NTase DwCdnB in complex with dATP
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSRRC BEAMLINE TPS 05A |
Synchrotron site | NSRRC |
Beamline | TPS 05A |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-05-11 |
Detector | DECTRIS EIGER2 X 9M |
Wavelength(s) | 0.99984 |
Spacegroup name | P 1 |
Unit cell lengths | 35.355, 46.614, 59.644 |
Unit cell angles | 99.56, 105.81, 100.12 |
Refinement procedure
Resolution | 22.000 - 2.190 |
R-factor | 0.16521 |
Rwork | 0.164 |
R-free | 0.19571 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.012 |
RMSD bond angle | 1.403 |
Data scaling software | HKL-2000 |
Refinement software | REFMAC (5.8.0230) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.000 | 2.280 |
High resolution limit [Å] | 2.190 | 2.190 |
Rmerge | 0.019 | |
Number of reflections | 17231 | 1695 |
<I/σ(I)> | 37.853 | |
Completeness [%] | 96.2 | 95.5 |
Redundancy | 2.1 | 2.2 |
CC(1/2) | 0.995 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 277 | 2 % v/v Tacsimate, 0.1 M Bis-Tris pH 6.5, 20 % w/v PEG 3350. |