8YNP
RNA duplex containing Methylformamide
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | PHOTON FACTORY BEAMLINE BL-17A |
| Synchrotron site | Photon Factory |
| Beamline | BL-17A |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2020-11-29 |
| Detector | DECTRIS EIGER X 16M |
| Wavelength(s) | 0.91962 |
| Spacegroup name | P 1 |
| Unit cell lengths | 25.604, 27.932, 28.668 |
| Unit cell angles | 110.03, 114.81, 95.76 |
Refinement procedure
| Resolution | 25.150 - 1.400 |
| R-factor | 0.1537 |
| Rwork | 0.151 |
| R-free | 0.17250 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Data scaling software | XSCALE |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.17.1_3660) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 25.150 | 25.150 | 1.430 |
| High resolution limit [Å] | 1.400 | 6.250 | 1.400 |
| Rmerge | 0.071 | 0.053 | 0.231 |
| Rmeas | 0.084 | 0.063 | 0.270 |
| Total number of observations | 43501 | ||
| Number of reflections | 12164 | 148 | 841 |
| <I/σ(I)> | 12.58 | 17.53 | 7.07 |
| Completeness [%] | 93.9 | 96.7 | 89.3 |
| Redundancy | 3.576 | 3.345 | 3.711 |
| CC(1/2) | 0.993 | 0.994 | 0.950 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 293 | MPD, sodium cacodylate, spermine tetrahydrochloride |






