Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

8YMD

Galectin-3 with lychnose

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRF BEAMLINE BL18U1
Synchrotron siteSSRF
BeamlineBL18U1
Temperature [K]100
Detector technologyPIXEL
Collection date2019-10-31
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.9793
Spacegroup nameP 21 21 21
Unit cell lengths35.886, 57.383, 61.716
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution17.130 - 1.080
R-factor0.1415
Rwork0.141
R-free0.15890
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.010
RMSD bond angle1.150
Refinement softwarePHENIX ((1.18.2_3874: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]42.0201.100
High resolution limit [Å]1.0801.080
Rmerge0.0490.206
Number of reflections553292719
<I/σ(I)>45.7
Completeness [%]100.0
Redundancy6.2
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP298PEG

245663

PDB entries from 2025-12-03

PDB statisticsPDBj update infoContact PDBjnumon