8YLJ
Crystal structure of Pectobacterium atrosepticum PecS in complex with uric acid
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PAL/PLS BEAMLINE 7A (6B, 6C1) |
Synchrotron site | PAL/PLS |
Beamline | 7A (6B, 6C1) |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2022-10-07 |
Detector | ADSC QUANTUM 270 |
Wavelength(s) | 0.9793 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 52.528, 78.796, 39.878 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 26.260 - 2.050 |
R-factor | 0.2289 |
Rwork | 0.227 |
R-free | 0.27370 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 8ylf |
RMSD bond length | 0.002 |
RMSD bond angle | 0.431 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX |
Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.000 | 2.090 |
High resolution limit [Å] | 2.050 | 2.050 |
Number of reflections | 10908 | 529 |
<I/σ(I)> | 25.8 | 2.9 |
Completeness [%] | 99.9 | 100 |
Redundancy | 4.9 | 5.2 |
CC(1/2) | 0.989 | 0.675 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 291.15 | PEG 6000, Hepes, lithium chloride |