8YKK
Crystal structure of SARS main protease in complex with X77
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL02U1 |
Synchrotron site | SSRF |
Beamline | BL02U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2023-04-30 |
Detector | DECTRIS EIGER2 X 16M |
Wavelength(s) | 0.979183 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 106.440, 84.872, 54.310 |
Unit cell angles | 90.00, 105.55, 90.00 |
Refinement procedure
Resolution | 37.820 - 2.300 |
R-factor | 0.214479341917 |
Rwork | 0.213 |
R-free | 0.24803 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.007 |
RMSD bond angle | 0.914 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHENIX |
Refinement software | PHENIX (1.12_2829) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 37.820 | 2.430 |
High resolution limit [Å] | 2.300 | 2.300 |
Rmerge | 0.195 | 1.060 |
Number of reflections | 20609 | 3022 |
<I/σ(I)> | 6.6 | |
Completeness [%] | 99.8 | |
Redundancy | 6.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 0.1M Hepes pH7.5, 10% PEG8000, 8% Ethylene glycol |