Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

8YK6

Magnetic effects of thaumatin crystals; observation of the crystal growth of magneto-Archimedes levitation and magnetic orientation

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSPRING-8 BEAMLINE BL45XU
Synchrotron siteSPring-8
BeamlineBL45XU
Temperature [K]100
Detector technologyPIXEL
Collection date2023-05-16
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.775
Spacegroup nameP 41 21 2
Unit cell lengths58.083, 58.083, 150.470
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution37.990 - 0.990
R-factor0.12639
Rwork0.126
R-free0.13382
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.012
RMSD bond angle1.920
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwareMOLREP
Refinement softwareREFMAC (5.8.0267)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]45.9801.000
High resolution limit [Å]0.9900.990
Rpim0.0260.314
Number of reflections1454717116
<I/σ(I)>20.63.5
Completeness [%]99.0100
Redundancy8.28
CC(1/2)0.9980.930
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1BATCH MODE6.529384 mM ADA pH 6.5, 42 mM GdCl3, 0.51 M NaK-tartrate, 0.017 % NaN3

245663

PDB entries from 2025-12-03

PDB statisticsPDBj update infoContact PDBjnumon