8Y9T
Crystal structure of nanobody MY6322 bound to human serum albumin (HSA)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL10U2 |
Synchrotron site | SSRF |
Beamline | BL10U2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2023-01-06 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.979183 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 167.951, 73.699, 86.008 |
Unit cell angles | 90.00, 118.74, 90.00 |
Refinement procedure
Resolution | 75.410 - 2.400 |
R-factor | 0.26628 |
Rwork | 0.263 |
R-free | 0.32447 |
Structure solution method | MOLECULAR REPLACEMENT |
Data reduction software | DIALS (0.7.7) |
Data scaling software | DIALS (0.7.7) |
Phasing software | PHASER (2.8.3) |
Refinement software | REFMAC (5.8.0425) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 75.410 | 2.460 |
High resolution limit [Å] | 2.400 | 2.400 |
Rmerge | 0.079 | 0.508 |
Rpim | 0.052 | 0.434 |
Number of reflections | 35902 | 2440 |
<I/σ(I)> | 9.4 | 1.5 |
Completeness [%] | 99.2 | 91.6 |
Redundancy | 5.4 | 3.1 |
CC(1/2) | 0.991 | 0.780 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 4.6 | 298 | 0.1 M Sodium acetate trihydrate pH 4.6, 1.8 M Ammonium sulfate |