8Y1Y
Crystal structure of the Mcl-1 in complex with a long BH3 peptide of BAK
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL02U1 |
Synchrotron site | SSRF |
Beamline | BL02U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-10-18 |
Detector | DECTRIS EIGER2 S 9M |
Wavelength(s) | 0.979183 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 52.484, 59.187, 59.877 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 39.470 - 2.010 |
R-factor | 0.2115 |
Rwork | 0.207 |
R-free | 0.25230 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.005 |
RMSD bond angle | 0.643 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHENIX |
Refinement software | PHENIX ((1.20.1_4487: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 39.470 | 2.084 |
High resolution limit [Å] | 2.010 | 2.010 |
Rmerge | 0.113 | 1.022 |
Rmeas | 0.126 | 1.132 |
Rpim | 0.054 | 0.479 |
Number of reflections | 12840 | 1255 |
<I/σ(I)> | 10.31 | 2.64 |
Completeness [%] | 99.6 | 99.45 |
Redundancy | 5.2 | 5.3 |
CC(1/2) | 0.996 | 0.783 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 291 | 0.01M Nickel (II) Chloride, 0.1M Tris-HCl pH 8.5, 20% polyethylene glycol monomethyl ether 2000 |