8XZM
Crystal structure of folE riboswitch with DHN
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL18U1 |
Synchrotron site | SSRF |
Beamline | BL18U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-12-11 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.97853 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 48.808, 57.085, 63.422 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 28.540 - 1.980 |
R-factor | 0.2096 |
Rwork | 0.208 |
R-free | 0.23800 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.004 |
RMSD bond angle | 1.088 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | PHASER |
Refinement software | PHENIX ((1.18.2_3874: ???)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.010 |
High resolution limit [Å] | 1.980 | 5.370 | 1.980 |
Rmerge | 0.120 | 0.091 | 0.673 |
Rmeas | 0.127 | 0.098 | 0.702 |
Rpim | 0.041 | 0.034 | 0.197 |
Total number of observations | 149384 | ||
Number of reflections | 12927 | 728 | 614 |
<I/σ(I)> | 5.7 | ||
Completeness [%] | 99.9 | 99.5 | 100 |
Redundancy | 11.6 | 8.6 | 12.4 |
CC(1/2) | 0.989 | 0.997 | 0.925 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 289 | 0.08 M Sodium chloride, 0.04 M Sodium cacodylate trihydrate pH 7.0, 30% v/v MPD, 0.012 M Spermine tetrahydrochloride |