8XWO
Vibrio harveyi chitoporin in complex with minocycline
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | NSRRC BEAMLINE TPS 05A |
| Synchrotron site | NSRRC |
| Beamline | TPS 05A |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2020-08-17 |
| Detector | MARMOSAIC 300 mm CCD |
| Wavelength(s) | 0.987 |
| Spacegroup name | P 1 |
| Unit cell lengths | 92.393, 92.500, 96.522 |
| Unit cell angles | 101.11, 101.14, 109.72 |
Refinement procedure
| Resolution | 20.020 - 3.400 |
| R-factor | 0.1861 |
| Rwork | 0.182 |
| R-free | 0.26210 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 5mdq |
| RMSD bond length | 0.010 |
| RMSD bond angle | 1.212 |
| Data reduction software | HKL-2000 |
| Data scaling software | HKL-2000 (3.27) |
| Phasing software | PHENIX |
| Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 20.020 | 20.000 | 3.460 |
| High resolution limit [Å] | 3.400 | 8.960 | 3.400 |
| Rmerge | 0.018 | 0.164 | |
| Rmeas | 0.086 | 0.025 | 0.231 |
| Rpim | 0.061 | 0.018 | 0.164 |
| Number of reflections | 36533 | 1893 | 1477 |
| <I/σ(I)> | 53.9 | ||
| Completeness [%] | 95.0 | 97.8 | 77.3 |
| Redundancy | 1.9 | 1.9 | 1.8 |
| CC(1/2) | 0.942 | 0.999 | 0.942 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 |






