8XUF
CDF1 Dof domain in palindromic-bound complex with DNA duplex
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | PHOTON FACTORY BEAMLINE AR-NE3A |
| Synchrotron site | Photon Factory |
| Beamline | AR-NE3A |
| Temperature [K] | 95 |
| Detector technology | PIXEL |
| Collection date | 2021-11-06 |
| Detector | DECTRIS PILATUS 2M-F |
| Wavelength(s) | 1.0 |
| Spacegroup name | P 42 21 2 |
| Unit cell lengths | 79.442, 79.442, 93.729 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 35.530 - 2.300 |
| R-factor | 0.2301 |
| Rwork | 0.229 |
| R-free | 0.24940 |
| Structure solution method | MOLECULAR REPLACEMENT |
| RMSD bond length | 0.007 |
| RMSD bond angle | 1.002 |
| Data reduction software | XDS |
| Data scaling software | Aimless |
| Phasing software | PHENIX (1.19.2_4158) |
| Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 35.530 | 2.382 |
| High resolution limit [Å] | 2.300 | 2.300 |
| Rmerge | 0.053 | 1.359 |
| Rmeas | 0.056 | 1.413 |
| Rpim | 0.015 | 0.382 |
| Number of reflections | 13900 | 1344 |
| <I/σ(I)> | 34.42 | 2.29 |
| Completeness [%] | 99.8 | 100 |
| Redundancy | 12.9 | 13.4 |
| CC(1/2) | 1.000 | 0.821 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 293 | 0.1 M HEPES-NaOH, 50 mM magnesium chloride hexahydrate and 30% polyethylene glycol (PEG) 550 monomethyl ether (MME) |






