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8XS2

Crystal structure of Fab fragment of anti-osteocalcin C-terminal peptide antibody KTM219 with addition of fluorophore TAMRA

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPHOTON FACTORY BEAMLINE BL-5A
Synchrotron sitePhoton Factory
BeamlineBL-5A
Temperature [K]95
Detector technologyPIXEL
Collection date2019-02-23
DetectorDECTRIS PILATUS3 6M
Wavelength(s)1.000
Spacegroup nameP 21 2 21
Unit cell lengths66.185, 69.520, 96.653
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution50.000 - 2.140
R-factor0.20438
Rwork0.202
R-free0.24426
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5x5x
RMSD bond length0.010
RMSD bond angle1.456
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0135)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0002.180
High resolution limit [Å]2.1405.8102.140
Rmerge0.1150.0331.015
Rmeas0.1200.0351.060
Rpim0.0330.0100.302
Number of reflections2497213881216
<I/σ(I)>5.458.92.47
Completeness [%]99.599.998.1
Redundancy12.61211.8
CC(1/2)0.9991.0000.815
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.52930.1 M HEPES, 0.3 M Ammonium Acetate, 25% PEG 3350, 0.6 mM TAMRA

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