8XP9
Crystal structure of d(ACGCCGT/ACGGCGT)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSRRC BEAMLINE BL15A1 |
Synchrotron site | NSRRC |
Beamline | BL15A1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2018-04-14 |
Detector | RAYONIX MX300HE |
Wavelength(s) | 1.00000 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 46.613, 46.690, 75.106 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 22.060 - 2.340 |
R-factor | 0.2563 |
Rwork | 0.255 |
R-free | 0.27060 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.010 |
RMSD bond angle | 1.304 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX |
Refinement software | PHENIX ((1.20.1_4487: ???)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 30.000 | 10.000 | 2.430 |
High resolution limit [Å] | 2.340 | 5.060 | 2.350 |
Rmerge | 0.055 | 0.035 | 0.624 |
Rmeas | 0.060 | 0.038 | 0.684 |
Rpim | 0.024 | 0.015 | 0.273 |
Number of reflections | 7178 | 776 | 679 |
<I/σ(I)> | 14.6 | ||
Completeness [%] | 98.5 | 96 | 96.2 |
Redundancy | 6.6 | 5.9 | 5.7 |
CC(1/2) | 0.999 | 0.907 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293.15 | 0.5mM CG duplex was mixed in a solution containing 50mM MES (pH=6.5), 1mM Spermine HCl, 20% PEG 400 |