8XMZ
Crystal structure of a novel porphyran-binding carbohydrate binding module
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL19U1 |
Synchrotron site | SSRF |
Beamline | BL19U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2023-07-02 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.9785 |
Spacegroup name | P 65 2 2 |
Unit cell lengths | 95.614, 95.614, 215.531 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 32.950 - 2.500 |
R-factor | 0.2635 |
Rwork | 0.260 |
R-free | 0.29940 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.003 |
RMSD bond angle | 0.653 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX ((1.20.1_4487: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 47.810 | 2.600 |
High resolution limit [Å] | 2.500 | 2.500 |
Rmerge | 0.091 | 1.158 |
Rmeas | 0.094 | 1.188 |
Rpim | 0.021 | 0.264 |
Total number of observations | 398629 | 45470 |
Number of reflections | 21013 | 2302 |
<I/σ(I)> | 26.3 | 3.5 |
Completeness [%] | 99.9 | |
Redundancy | 19 | 19.8 |
CC(1/2) | 1.000 | 0.979 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 291 | 0.2 M Ammonium sulfate, 0.1 M MES monohydrate pH 6.5, 30% w/v Polyethylene glycol monomethyl ether 5,000 |