8XGL
Structure of the Magnaporthe oryzae effector NIS1
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL10U2 |
Synchrotron site | SSRF |
Beamline | BL10U2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-08-29 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.979 |
Spacegroup name | H 3 |
Unit cell lengths | 129.800, 129.800, 79.960 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 29.120 - 2.300 |
R-factor | 0.1782 |
Rwork | 0.177 |
R-free | 0.19430 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | AlphaFold |
RMSD bond length | 0.004 |
RMSD bond angle | 0.702 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX ((1.20.1_4487: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 29.120 | 2.382 |
High resolution limit [Å] | 2.300 | 2.300 |
Number of reflections | 22307 | 2237 |
<I/σ(I)> | 11.42 | |
Completeness [%] | 99.9 | |
Redundancy | 8.3 | |
CC(1/2) | 0.992 | 0.594 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 289 | 0.1 M BIS-Tris (pH 6.5), 2.0 M ammonium sulfate |