Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

8XDX

Amylase A from Alkalimonas delamerensis

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRF BEAMLINE BL19U1
Synchrotron siteSSRF
BeamlineBL19U1
Temperature [K]100
Detector technologyPIXEL
Collection date2023-04-21
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.9791
Spacegroup nameP 21 21 21
Unit cell lengths49.469, 71.433, 146.535
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution40.670 - 1.260
R-factor0.166
Rwork0.166
R-free0.18050
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.005
RMSD bond angle0.842
Data reduction softwarexia2
Data scaling softwarexia2
Phasing softwarePHASER
Refinement softwarePHENIX (1.17.1_3660)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]73.2701.290
High resolution limit [Å]1.2601.260
Rmerge0.117
Number of reflections1088441529
<I/σ(I)>13.6
Completeness [%]77.4
Redundancy10.4
CC(1/2)0.9950.983
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP2920.2 M sodium fluoride, 0.1 M Bis-Tris propane, 20% (w/v) PEG3350

250835

PDB entries from 2026-03-18

PDB statisticsPDBj update infoContact PDBjnumon