8XCL
Character of TseP: a dual functional effector of type VI secretion system
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL19U1 |
Synchrotron site | SSRF |
Beamline | BL19U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-06-18 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.979 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 44.481, 138.797, 95.827 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 47.914 - 2.270 |
R-factor | 0.1889 |
Rwork | 0.187 |
R-free | 0.22740 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | AlphaFold |
RMSD bond length | 0.007 |
RMSD bond angle | 0.871 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHENIX |
Refinement software | PHENIX (1.16-3549) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 48.100 | 6.720 | 2.400 |
High resolution limit [Å] | 2.260 | 4.780 | 2.260 |
Rmerge | 0.218 | 0.145 | 0.771 |
Rmeas | 0.236 | 0.157 | 0.836 |
Number of reflections | 25776 | 1829 | 4304 |
<I/σ(I)> | 6.1 | ||
Completeness [%] | 95.9 | ||
Redundancy | 12.9 | ||
CC(1/2) | 0.984 | 0.981 | 0.840 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 291 | 0.1 M Sodium formate pH 7.0 ,12% w/v PEG 3350 |