8X35

Neryl diphosphate synthase from Solanum lycopersicum complexed with DMSAPP, IPP, and magnesium ion (form A)

Experimental procedure

Experimental method	SINGLE WAVELENGTH
Source type	SYNCHROTRON
Source details	SPRING-8 BEAMLINE BL32XU
Synchrotron site	SPring-8
Beamline	BL32XU
Temperature [K]	80
Detector technology	PIXEL
Collection date	2021-10-01
Detector	DECTRIS EIGER X 9M
Wavelength(s)	1.0
Spacegroup name	C 1 2 1
Unit cell lengths	98.310, 49.230, 121.390
Unit cell angles	90.00, 91.07, 90.00

Refinement procedure

Resolution	49.146 - 1.920
Rwork	0.219
R-free	0.25660
Structure solution method	MOLECULAR REPLACEMENT
Starting model (for MR)	7vpc
RMSD bond length	0.011
RMSD bond angle	1.566
Data reduction software	DIALS
Data scaling software	XDS
Phasing software	PHASER
Refinement software	REFMAC (5.8.0411)

Data quality characteristics

	Overall	Outer shell
Low resolution limit [Å]	50.000	2.040
High resolution limit [Å]	1.920	1.920
Rmeas		3.100
Number of reflections	44740	7185
<I/σ(I)>	9.7	1.07
Completeness [%]	100.0	100
Redundancy	11.7	12
CC(1/2)	0.994	0.771

Crystallization Conditions

crystal ID	method	pH	temperature	details
1	VAPOR DIFFUSION, HANGING DROP	7	293	DL-malic acid, PEG3350